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Difference between revisions of "MiPNet08.09 CellRespiration"

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{{Publication
{{Publication
|title=[[Image:O2k-Protocols.jpg|right|80px|link=O2k-Protocols|O2k-Protocols contents]] High-resolution respirometry and coupling control protocol with intact cells: ROUTINE, LEAK, ETS, ROX. Ā 
|title=[[Image:O2k-Protocols.jpg|right|80px|link=O2k-Protocols|O2k-Protocols contents]] High-resolution respirometry and coupling control protocol with intact cells: ROUTINE, LEAK, ETS, ROX. Ā 
|info=[[File:PDF.jpg|50px|link=http://wiki.oroboros.at/images/d/da/MiPNet08.09_CellRespiration.pdf |Bioblast pdf]] Ā»[http://www.bioblast.at/index.php/File:MiPNet08.09_CellRespiration.pdf Versions]
|info=[[File:PDF.jpg|100px|link=http://wiki.oroboros.at/images/d/da/MiPNet08.09_CellRespiration.pdf |Bioblast pdf]] Ā 
|authors=OROBOROS
|authors=OROBOROS
|year=2015-01-11
|year=2015-01-11
|journal=Mitochondr Physiol Network
|journal=Mitochondr Physiol Network
|abstract=Gnaiger E, Renner K (2015) High-resolution respirometry and coupling control protocol with intact cells: ROUTINE, LEAK, ETS, ROX. Mitochondr Physiol Network 08.09(09):1-8.
|abstract='''Gnaiger E, Renner K (2015) High-resolution respirometry and coupling control protocol with intact cells: ROUTINE, LEAK, ETS, ROX. Mitochondr Physiol Network 08.09(09):1-8.''' Ā»[http://www.bioblast.at/index.php/File:MiPNet08.09_CellRespiration.pdf Versions]


An experiment on cellular respiration is reported from an O2k workshop on high-resolution respirometry. Leukemia cells were incubated at a density of 1 million cells/ml in 2 ml culture medium in two O2k-Chambers operated in parallel. Cellular ROUTINE respiration, ''J''<sub>R</sub>, resulted in volume-specific oxygen consumption of 20 pmolĀ·sĀ­<sup>-1</sup>Ā·mlĀ­<sup>-1</sup>. Oxygen concentration changed by merely 6.4 and 6.5 ĀµM in the two O2k-Chambers over a period of 5 min (<1% air saturation per minute). Inhibition by oligomycin (''J<sub>L</sub>''), and rotenone (residual oxygen consumption, ''J''<sub>ROX</sub>; after uncoupling) reduced respiration to 5 and 1 pmolĀ·sĀ­<sup>-1</sup>Ā·mlĀ­<sup>-1</sup>, while inducing the noncoupled state by the uncoupler FCCP revealed the capacity of the electron transfer system (ETS) at ''J<sub>E</sub>'' of 50 pmolĀ·sĀ­<sup>-1</sup>Ā·mlĀ­<sup>-1</sup>.Ā  The ROUTINE flux control ratio, ''R/E'', was 0.39 (uncoupling control ratio, UCR=''E/R''=2.6), and the LEAK flux control ratio, ''L/E'', was 0.09 (''E/L''=12.0). This indicates tight coupling of OXPHOS, and a large ETS excess capacity over ROUTINE respiration. The net ROUTINE flux control ratio, net''R''=(''R-L'')/''E'' was 0.30, indicating that 30% of ETS capacity was activated for ATP production.
An experiment on cellular respiration is reported from an O2k workshop on high-resolution respirometry. Leukemia cells were incubated at a density of 1 million cells/ml in 2 ml culture medium in two O2k-Chambers operated in parallel. Cellular ROUTINE respiration, ''J''<sub>R</sub>, resulted in volume-specific oxygen consumption of 20 pmolĀ·sĀ­<sup>-1</sup>Ā·mlĀ­<sup>-1</sup>. Oxygen concentration changed by merely 6.4 and 6.5 ĀµM in the two O2k-Chambers over a period of 5 min (<1% air saturation per minute). Inhibition by oligomycin (''J<sub>L</sub>''), and rotenone (residual oxygen consumption, ''J''<sub>ROX</sub>; after uncoupling) reduced respiration to 5 and 1 pmolĀ·sĀ­<sup>-1</sup>Ā·mlĀ­<sup>-1</sup>, while inducing the noncoupled state by the uncoupler FCCP revealed the capacity of the electron transfer system (ETS) at ''J<sub>E</sub>'' of 50 pmolĀ·sĀ­<sup>-1</sup>Ā·mlĀ­<sup>-1</sup>.Ā  The ROUTINE flux control ratio, ''R/E'', was 0.39 (uncoupling control ratio, UCR=''E/R''=2.6), and the LEAK flux control ratio, ''L/E'', was 0.09 (''E/L''=12.0). This indicates tight coupling of OXPHOS, and a large ETS excess capacity over ROUTINE respiration. The net ROUTINE flux control ratio, net''R''=(''R-L'')/''E'' was 0.30, indicating that 30% of ETS capacity was activated for ATP production.

Revision as of 17:11, 8 March 2016

Publications in the MiPMap
O2k-Protocols contents
High-resolution respirometry and coupling control protocol with intact cells: ROUTINE, LEAK, ETS, ROX.

Ā» Bioblast pdf

OROBOROS (2015-01-11) Mitochondr Physiol Network

Abstract: Gnaiger E, Renner K (2015) High-resolution respirometry and coupling control protocol with intact cells: ROUTINE, LEAK, ETS, ROX. Mitochondr Physiol Network 08.09(09):1-8. Ā»Versions

An experiment on cellular respiration is reported from an O2k workshop on high-resolution respirometry. Leukemia cells were incubated at a density of 1 million cells/ml in 2 ml culture medium in two O2k-Chambers operated in parallel. Cellular ROUTINE respiration, JR, resulted in volume-specific oxygen consumption of 20 pmolĀ·s-1Ā·ml-1. Oxygen concentration changed by merely 6.4 and 6.5 ĀµM in the two O2k-Chambers over a period of 5 min (<1% air saturation per minute). Inhibition by oligomycin (JL), and rotenone (residual oxygen consumption, JROX; after uncoupling) reduced respiration to 5 and 1 pmolĀ·s-1Ā·ml-1, while inducing the noncoupled state by the uncoupler FCCP revealed the capacity of the electron transfer system (ETS) at JE of 50 pmolĀ·s-1Ā·ml-1. The ROUTINE flux control ratio, R/E, was 0.39 (uncoupling control ratio, UCR=E/R=2.6), and the LEAK flux control ratio, L/E, was 0.09 (E/L=12.0). This indicates tight coupling of OXPHOS, and a large ETS excess capacity over ROUTINE respiration. The net ROUTINE flux control ratio, netR=(R-L)/E was 0.30, indicating that 30% of ETS capacity was activated for ATP production.

Automatic correction for instrumental background amounted to 13% for ROUTINE respiration, but to >50% and 180% for JL and JROX, respectively, illustrating the importance of real-time correction. The experiment illustrates the sensitivity and resproducibility of high-resolution respirometry with the OROBOROS O2k. Calibrations and routine corrections provide the basis of the high accuracy required for mitochondrial respiratory physiology. Real-time analyses were performed, combining high-resolution with instant diagnostic information. In this update graphs are presented illustrating some features of DatLab.

>> Product: OROBOROS O2k, O2k-Catalogue


ā€¢ O2k-Network Lab: AT_Innsbruck_OROBOROS


Labels: MiParea: Respiration, Instruments;methods 


Organism: Human  Tissue;cell: Blood cells  Preparation: Intact cells 


Coupling state: LEAK, ROUTINE, ETS"ETS" is not in the list (LEAK, ROUTINE, OXPHOS, ET) of allowed values for the "Coupling states" property. 

HRR: Oxygraph-2k, O2k-Protocol 

O2k-Demo, O2k-Core 

Ā» MitoPedia: Respiratory states ROUTINE LEAK ETS ROX

The figure represents flux control ratios (FCR) normalized to state ETS (E) in chambers A and B. ROUTINE respiration in these cells is regulated at 0.39 of ETS capacity (R/E). Oligomycin (Omy) inhibits respiration to 0.08 ETS capacity (L/E).

Further information

Ā» Instructions for using templates for data evaluation are given in MiPNet08.09 (see above) and MiPNet10.04.

Ā» Excel Templates and DatLab-Demo Files

Ā» Coupling control protocol