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Difference between revisions of "SUIT-002 O2 mt D005"

From Bioblast
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{{MitoPedia
{{MitoPedia
|SUIT number=SUIT-2_mt_A05
|description=[[File:1D;2M.1;3Oct;3c;4M2;5P;6G;7S;8Gp;9U;10Rot-.png|400px]]
|abbr=FNSGp(PGM)
|abbr=FNSGp(PGM)
|SUIT number=2_mt
|application=O2
|application=O2
|description=[[File:1D;2M.1;3Oct;3c;4M2;5P;6G;7S;8Gp;9U;10Rot-.png|400px]]
|info='''A: SUIT 2 is the RP2''' - [[MiPNet21.06 SUIT RP]]
|info='''A: SUIT 2 is the RP2''' - [[MiPNet21.06 SUIT RP]]
}}
}}
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__TOC__
__TOC__


== DL-Protocol and template ==


== Harmonized SUIT protocols ==
:::: [[1D;2OctM;3P;4G;5S;6Gp;7U;8Rot-#DL-Protocols_for_SUIT_protocol_RP2_.28DatLab_7.1.29|SUIT RP2]]:1D;1M.1;2Oct;2c;2M2;3P;4G;5S;6Gp;7U;'''8Rot''';9Ama;'''10Tm''';11Azd
Β 
Β 
=== RP1 and RP2 ===
'''SUIT RP1''' [[File:1PM;2D;2c;3U;4G;5S;6Oct;7Rot;8Gp;9Ama;10AsTm;11Azd.png|400px|SUIT-RP1]]
'''SUIT RP2''' [[File:1D;2M.1;3Oct;3c;4M2;5P;6G;7S;8Gp;9U;10Rot;11Ama;12AsTm;13Azd.png|500px|SUIT-RP2]]
Β 
:::: [[1PM;2D;3U;4G;5S;6Oct;7Rot;8Gp-|SUIT RP1]]: 1PM;2D;2c;3U;4G;5S;6Oct;7Rot;'''8Gp''';9Ama;'''10AsTm''';11Azd
:::: '''SUIT RP2''': 1D;2M.1;3Oct;3c;4M2;5P;6G;7S;8Gp;9U;'''10Rot''';11Ama;'''12AsTm''';13Azd
Β 
[[File:RP1&RP2.png|400px]] '''Harmonization between RP1 and RP2'''
Β 
=== RP1 and RP2 in cells ===
RP2 can be assessed in cells after the selective plasma membrane permeabilization. Digitonin is a mild detergent that permeabilizes plasma membranes. The optimum effective digitonin concentration for complete plasma membrane permeabilization of cultured cells can be determined directly in a respirometric protocol (see [[Digitonin]]). The use of intact cells allows the possibility to evaluate respiration in two different modules: intact cells and permeabilized cells. ROUTINE respiration (ce1) is obtained before digitonin is employed, whereas after the use of digitonin we can address differentet [[Electron transfer-pathway state|Electron transfer-pathway statea]].
Β 
:::: [[1PM;2D;3U;4G;5S;6Oct;7Rot;8Gp-#Harmonized_SUIT_protocols|SUIT RP1 in cells]]: '''ce1''';1Dig;1PM;2D;2c;3U;4G;5S;6Oct;7Rot;'''8Gp''';9Ama;'''10Tm''';11Azd
:::: '''SUIT RP2 in cells''': '''ce1''';1Dig;1D;2M.1;3Oct;3c;4M2;5P;6G;7S;8Gp;9U;'''10Rot''';11Ama;'''12AsTm''';13Azdd
Β 
[[File:RP1&RP2_pce(Dig).png|400px]] '''Harmonization between RP1 and RP2 in cells'''
Β 
Β 
=== RP1 and RP2 in PBMCs and PTLs ===
In PBMCs and PLTs the reference protocol RP1 is performed in the absense of Oct: [[1PM;2D;3U;4G;5S;6Rot;7Gp-|SUIT 1 for PBMCs and PTLs]]
Β 
:::: [[1PM;2D;3U;4G;5S;6Oct;7Rot;8Gp-#Harmonized_SUIT_protocols|SUIT RP1 in PBMCs and PTLs]]'''SUIT RP1 for PBMCs and PLTs''':1PM;2D;2c;3U;4G;5S;6Rot;'''7Gp''';8Ama;'''9AsTm''';10Azd
:::: '''SUIT RP2 PBMCs and PLTs''': 1D;2M.1;3Oct;3c;4M2;5P;6G;7S;8Gp;9U;'''10Rot''';11Ama;'''12AsTm''';13Azd
Β 
[[File:Reference protocol RP1&RP2_pce_PBMCs_PTLs.png|400px]] '''Harmonization between RP1 and RP2 in PBMC and PTL cells'''




== SUIT O2 DLP for SUIT 2 (RP2) (DatLab 7.3) ==
== SUIT O2 DLP for SUIT 2 (RP2) (DatLab 7.3) ==


''Updating this page (2018-06-13) for DatLab 7.3 DLP files''
:::: ''Updating this page (2018-06-13) for DatLab 7.3 DLP files''





Revision as of 12:35, 25 June 2018


high-resolution terminology - matching measurements at high-resolution


SUIT-002 O2 mt D005

Description

1D;2M.1;3Oct;3c;4M2;5P;6G;7S;8Gp;9U;10Rot-.png

Abbreviation: FNSGp(PGM)

Reference: A: SUIT 2 is the RP2 - MiPNet21.06 SUIT RP

SUIT number: SUIT-2_mt_A05

O2k-Application: O2


MitoPedia concepts: SUIT protocol, SUIT A 

MitoPedia: SUIT - SUIT reference protocol RP2
SUIT-category: FNSGp(PGM)
SUIT protocol pattern: diametral


DL-Protocol and template

SUIT RP2:1D;1M.1;2Oct;2c;2M2;3P;4G;5S;6Gp;7U;8Rot;9Ama;10Tm;11Azd


SUIT O2 DLP for SUIT 2 (RP2) (DatLab 7.3)

Updating this page (2018-06-13) for DatLab 7.3 DLP files


References