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From Bioblast
| Year | Reference | Coupling | Pathway | Preparation | Organism | Tissue;cell | |
|---|---|---|---|---|---|---|---|
| Stanford 2018 Cell Metab | 2018 | Stanford KI, Lynes MD, Takahashi H, Baer LA, Arts PJ, May FJ, Lehnig AC, Middelbeek RJW, Richard JJ, So K, Chen EY, Gao F, Narain NR, Distefano G, Shettigar VK, Hirshman MF, Ziolo MT, Kiebish MA, Tseng YH, Coen PM, Goodyear LJ (2018) 12,13-diHOME: an exercise-induced lipokine that increases skeletal muscle fatty acid uptake. Cell Metab 27:1111-20. | LEAK OXPHOS ET | F ROX | Permeabilized tissue | Human Mouse | Skeletal muscle |
| Stankova 2018 MiP2018 |  Impact of western diet on energy metabolism in mouse liver. | OXPHOS ET | S F N | Homogenate | Mouse | Liver | |
| Stankova 2020 Int J Mol Sci | 2020 | Staňková P, Kučera O, Peterová E, Lotková H, Maseko TE, Nožičková K, Červinková Z (2020) Adaptation of mitochondrial substrate flux in a mouse model of nonalcoholic fatty liver disease. Int J Mol Sci 21:E1101. | LEAK OXPHOS | F N S Gp NS ROX | Homogenate | Mouse | Liver |
| Stein 2018 Cell Rep | 2018 | Stein CS, Jadiya P, Zhang X, McLendon JM, Abouassaly GM, Witmer NH, Anderson EJ, Elrod JW, Boudreau RL (2018) Mitoregulin: A lncRNA-encoded microprotein that supports mitochondrial supercomplexes and respiratory efficiency. Cell Rep 23:3710-20. | LEAK OXPHOS | F N | Permeabilized tissue | Human | Heart Skeletal muscle |
| Stephenson 2012 J Appl Physiol (1985) | 2012 | Stephenson EJ, Stepto NK, Koch LG, Britton SL, Hawley JA (2012) Divergent skeletal muscle respiratory capacities in rats artificially selected for high and low running ability: a role for Nor1? J Appl Physiol (1985) 113:1403-12. | LEAK OXPHOS ET | F N S CIV NS Other combinations ROX | Permeabilized tissue | Rat | Skeletal muscle |
| Stride 2012 Front Physiol | 2012 | Stride N, Larsen S, Treebak JT, Hansen CN, Hey-Mogensen M, Speerschneider T, Jensen TE, Jeppesen J, Wojtaszewski JF, Richter EA, Køber L, Dela F (2012) 5'-AMP activated protein kinase is involved in the regulation of myocardial β-oxidative capacity in mice. Front Physiol 3:33. | OXPHOS | F | Permeabilized tissue | Mouse | Heart |
| Sumbalova 2014 Abstract MiP2014 | Optimization of malate concentration for high-resolution respirometry: mitochondria from rat liver and brain. | OXPHOS ET | F N S NS | Isolated mitochondria | Rat | Nervous system Liver | |
| Sumbalova 2016 Abstract Mito Xmas Meeting Innsbruck | Methods for evaluation of mitochondrial membrane potential with multi-sensor high-resolution respirometry: potentiometry vs fluorometry. | LEAK OXPHOS ET | F N S NS ROX | Mouse | Nervous system | ||
| Sumbalova 2016b Abstract MitoFit Science Camp 2016 | Human blood cells: isolation and HRR. | LEAK ROUTINE OXPHOS ET | F N S Gp CIV NS Other combinations ROX | Permeabilized cells Intact cells | Human | Blood cells Lymphocyte Platelet | |
| Sumbalova 2019a MiP2019 |  Platelet mitochondrial function, coenzyme Q10, and oxidative stress in patients with chronic kidney diseases. | LEAK OXPHOS | F N S Gp CIV NS ROX | Intact cells | Human | Platelet | |
| Sumbalova 2019b MiP2019 | The decline of mitochondrial respiration in isolated platelets after short-term storage. | LEAK OXPHOS | F N S Gp CIV NS ROX | Intact cells | Human | Platelet | |
| Svensson 2017 Acta Physiol (Oxf) | 2017 | Svensson K, LaBarge SA, Martins VF, Schenk S (2017) Temporal overexpression of SIRT1 in skeletal muscle of adult mice does not improve insulin sensitivity or markers of mitochondrial biogenesis. Acta Physiol (Oxf) 221:193-203. | OXPHOS ET LEAK | F N S NS ROX | Permeabilized tissue | Mouse | Skeletal muscle |
| Svensson 2019 Am J Physiol Endocrinol Metab | 2019 | Svensson K, Tahvilian S, Martins VF, Dent JR, Lemanek A, Barooni N, Greyslak K, McCurdy CE, Schenk S (2019) Combined overexpression of SIRT1 and knockout of GCN5 in adult skeletal muscle does not affect glucose homeostasis or exercise performance in mice. Am J Physiol Endocrinol Metab 318:E145-51. | LEAK OXPHOS ET | F N S NS ROX | Permeabilized tissue | Mouse | Skeletal muscle |
| Szelechowski 2018 Sci Rep | 2018 | Szelechowski M, Amoedo N, Obre E, Léger C, Allard L, Bonneu M, Claverol S, Lacombe D, Oliet S, Chevallier S, Le Masson G, Rossignol R (2018) Metabolic reprogramming in amyotrophic lateral sclerosis. Sci Rep 8:3953. | LEAK ROUTINE ET | F ROX | Intact cells | Human | Endothelial;epithelial;mesothelial cell Fibroblast |
| Tahara 2009 Free Radic Biol Med | 2009 | Tahara EB, Navarete FD, Kowaltowski AJ (2009) Tissue-, substrate-, and site-specific characteristics of mitochondrial reactive oxygen species generation. Free Radic Biol Med 46:1283-97. | LEAK ET OXPHOS | F N NS ROX S Gp | Isolated mitochondria | Rat | Heart Skeletal muscle Nervous system Liver Kidney |
| Talati 2016 Am J Respir Crit Care Med | 2016 | Talati MH, Brittain EL, Fessel JP, Penner N, Atkinson J, Funke M, Grueter C, Jerome WG, Freeman M, Newman JH, West J, Hemnes AR (2016) Mechanisms of lipid accumulation in the bone morphogenetic protein receptor type 2 mutant right ventricle. Am J Respir Crit Care Med 194:719-28. | LEAK | F N | Permeabilized tissue | Mouse | Heart |
| Tarpey 2019 J Biol Chem | 2019 | Tarpey MD, Amorese AJ, Balestrieri NP, Fisher-Wellman KH, Spangenburg EE (2019) Doxorubicin causes lesions in the electron transport system of skeletal muscle mitochondria that are associated with a loss of contractile function. J Biol Chem 294:19709-22. | LEAK ET | F N S CIV | Permeabilized tissue Isolated mitochondria | Mouse | Skeletal muscle |
| Teulier 2016 Proc Biol Sci | 2016 | Teulier L, Weber JM, Crevier J, Darveau CA (2016) Proline as a fuel for insect flight: enhancing carbohydrate oxidation in hymenopterans. Proc Biol Sci 283: 20160333. | OXPHOS | F N S Gp NS Other combinations ROX | Permeabilized tissue | Hexapods | Skeletal muscle |
| Teulier 2019 Comp Biochem Physiol A Mol Integr Physiol | 2019 | Teulier L, Thoral E, Queiros Q, McKenzie DJ, Roussel D, Dutto G, Gasset E, Bourjea J, Saraux C (2019) Muscle bioenergetics of two emblematic Mediterranean fish species: Sardina pilchardus and Sparus aurata. Comp Biochem Physiol A Mol Integr Physiol 235:174-79. | LEAK OXPHOS ET | F N NS ROX | Intact cells | Fishes | Skeletal muscle |
| Thome 2020 JCI Insight | 2020 | Thome T, Kumar RA, Burke SK, Khattri RB, Salyers ZR, Kelley RC, Coleman MD, Christou DD, Hepple RT, Scali ST, Ferreira LF, Ryan TE (2020) Impaired muscle mitochondrial energetics is associated with uremic metabolite accumulation in chronic kidney disease. JCI Insight 6:e139826. | LEAK OXPHOS | F N S | Isolated mitochondria | Mouse | Skeletal muscle |
| Thome 2024 JCI Insight | 2024 | Thome T, Vugman NA, Stone LE, Wimberly K, Scali ST, Ryan TE (2024) A tryptophan-derived uremic metabolite-Ahr-Pdk4 axis governs skeletal muscle mitochondrial energetics in chronic kidney disease. JCI Insight [Epub ahead of print]. https://doi.org/10.1172/jci.insight.178372 | LEAK OXPHOS | F N | Permeabilized tissue Isolated mitochondria | Human Mouse | Skeletal muscle |
| Thrush 2018 Int J Obes (Lond) | 2018 | Thrush AB, Antoun G, Nikpay M, Patten DA, DeVlugt C, Mauger JF, Beauchamp BL, Lau P, Reshke R, Doucet É, Imbeault P, Boushel R, Gibbings D, Hager J, Valsesia A, Slack R, Al-Dirbashi OY, Dent R, McPherson R, Harper ME (2018) Diet-resistant obesity is characterized by a distinct plasma proteomic signature and impaired muscle fiber metabolism. Int J Obes (Lond) 42:353-62. | LEAK OXPHOS ET | F N CIV NS ROX | Permeabilized tissue | Human | Skeletal muscle |
| Tian 2023 Redox Biol | 2023 | Tian G, Zhou J, Quan Y, Kong Q, Li J, Xin Y, Wu W, Tang X, Liu X (2023) Voltage-dependent anion channel 1 (VDAC1) overexpression alleviates cardiac fibroblast activation in cardiac fibrosis via regulating fatty acid metabolism. https://doi.org/10.1016/j.redox.2023.102907 | F | Intact cells | Mouse | Heart Fibroblast | |
| Tiebe 2019 Sci Rep | 2019 | Tiebe M, Lutz M, Senyilmaz Tiebe D, Teleman AA (2019) Crebl2 regulates cell metabolism in muscle and liver cells. Sci Rep 9:19869. | LEAK OXPHOS ROUTINE | F N Gp ROX | Permeabilized cells Intact cells | Mouse | Skeletal muscle Liver |
| Timmers 2011 Cell Metab | 2011 | Timmers S, Konings E, Bilet L, Houtkooper RH, van de Weijer T, Goossens GH, Hoeks J, van der Krieken S, Ryu D, Kersten S, Moonen-Kornips E, Hesselink MK, Kunz I, Schrauwen-Hinderling VB, Blaak EE, Auwerx J, Schrauwen P (2011) Calorie restriction-like effects of 30 days of resveratrol supplementation on energy metabolism and metabolic profile in obese humans. Cell Metab 14:612-22. | LEAK OXPHOS ET | F N NS Other combinations ROX | Permeabilized tissue | Human | Skeletal muscle |
| Timmers 2016 Diabetes Care | 2016 | Timmers S, de Ligt M, Phielix E, van de Weijer T, Hansen J, Moonen-Kornips E, Schaart G, Kunz I, Hesselink MK, Schrauwen-Hinderling VB, Schrauwen P (2016) Resveratrol as add-on therapy in subjects with well-controlled type 2 diabetes: a randomized controlled trial. Diabetes Care 39:2211-17. | LEAK ET OXPHOS | F N NS | Permeabilized tissue | Human | Skeletal muscle |
| Timon-Gomez 2023 EUROMIT2023 Bologna |  Timon-Gomez A, Cardoso L, Baglivo E, Doerrier C, Gnaiger E (2023) Mitochondrial injury in warm ischemia studied by high-resolution respirometry. EUROMIT2023 International Conference on Mitochondrial Pathology. | OXPHOS ET | F N S Gp | Homogenate Isolated mitochondria Intact cells | Human Mouse | Heart Nervous system HEK | |
| Toledo 2018 Obesity (Silver Spring) | 2018 | Toledo FGS, Dubé JJ, Goodpaster BH, Stefanovic-Racic M, Coen PM, DeLany JP (2018) Mitochondrial respiration is associated with lower energy expenditure and lower aerobic capacity in African American women. Obesity (Silver Spring) 26:903-9. | LEAK OXPHOS ET | F N NS | Permeabilized tissue | Human | Skeletal muscle |
| Tomar 2022 Biochim Biophys Acta Bioenerg | 2022 | Tomar N, Zhang X, Kandel SM, Sadri S, Yang C, Liang M, Audi SH, Cowley AW Jr, Dash RK (2022) Substrate-dependent differential regulation of mitochondrial bioenergetics in the heart and kidney cortex and outer medulla. https://doi.org/10.1016/j.bbabio.2021.148518 | LEAK OXPHOS ET | F N S | Isolated mitochondria | Rat | Heart Kidney |
| Tonnesen 2021 Mol Cell Biochem | 2021 | Tonnesen PT, Hjortbak MV, Lassen TR, Seefeldt JM, Bøtker HE, Jespersen NR (2021) Myocardial salvage by succinate dehydrogenase inhibition in ischemia-reperfusion injury depends on diabetes stage in rats. Mol Cell Biochem 476:2675-84. | LEAK OXPHOS | F N | Permeabilized tissue | Rat | Heart |
| Torres 2018 Cell Metab | 2018 | Torres MJ, Kew KA, Ryan TE, Pennington ER, Lin CT, Buddo KA, Fix AM, Smith CA, Gilliam LA, Karvinen S, Lowe DA, Spangenburg EE, Zeczycki TN, Shaikh SR, Neufer PD (2018) 17β-estradiol directly lowers mitochondrial membrane microviscosity and improves bioenergetic function in skeletal muscle. Cell Metab 27:167-79. https://doi.org/10.1016/j.cmet.2017.10.003 | LEAK OXPHOS ET | F N S CIV NS ROX | Permeabilized tissue | Mouse | Skeletal muscle |
| Trewin 2017 PLOS ONE | 2017 | Trewin AJ, Levinger I, Parker L, Shaw CS, Serpiello FR, Anderson MJ, McConell GK, Hare DL, Stepto NK (2017) Acute exercise alters skeletal muscle mitochondrial respiration and H2O2 emission in response to hyperinsulinemic-euglycemic clamp in middle-aged obese men. PLOS ONE 12:e0188421. | LEAK OXPHOS ET | F N NS ROX | Permeabilized tissue | Human | Skeletal muscle |
| Tsai 2016 Sci Rep | 2016 | Tsai HH, Chang SC, Chou CH, Weng TP, Hsu CC, Wang JS (2016) Exercise training alleviates hypoxia-induced mitochondrial dysfunction in the lymphocytes of sedentary males. Sci Rep 6:35170. | LEAK ROUTINE OXPHOS ET | F N S NS Other combinations ROX | Permeabilized cells Intact cells | Human | Lymphocyte Blood cells |
| Tsuda 2018 J Cachexia Sarcopenia Muscle | 2018 | Tsuda M, Fukushima A, Matsumoto J, Takada S, Kakutani N, Nambu H, Yamanashi K, Furihata T, Yokota T, Okita K, Kinugawa S, Anzai T (2018) Protein acetylation in skeletal muscle mitochondria is involved in impaired fatty acid oxidation and exercise intolerance in heart failure. J Cachexia Sarcopenia Muscle 9:844-59. | OXPHOS LEAK | F N NS ROX | Permeabilized tissue | Mouse | Skeletal muscle |
| Tueller 2017 Biochem Biophys Res Commun | 2017 | Tueller DJ, Harley JS, Hancock CR (2017) Effects of curcumin and ursolic acid on the mitochondrial coupling efficiency and hydrogen peroxide emission of intact skeletal myoblasts. Biochem Biophys Res Commun 492:368-72. | LEAK ROUTINE OXPHOS | F N NS ROX | Permeabilized cells Intact cells | Skeletal muscle | |
| Ukropec 2017 MITOEAGLE Obergurgl |  Could functional state of muscle mitochondria reflect exercise-induced changes in insulin sensitivity, glucose tolerance and cognitive performance in individuals with mild cognitive impairment? | LEAK OXPHOS ET | F N S Gp NS | Permeabilized cells | Skeletal muscle | ||
| Urban 2017 MiP2017 |  Kinetics of inhibition of energy metabolism pathways by propofol in human skeletal muscle homogenates. | F N NS | Homogenate | Human | Skeletal muscle | ||
| Valentine 2018 J Gerontol A Biol Sci Med Sci | 2018 | Valentine JM, Li ME, Shoelson SE, Zhang N, Reddick RL, Musi N (2018) NFκB regulates muscle development and mitochondrial function. J Gerontol A Biol Sci Med Sci 75:647-53. | LEAK OXPHOS ET | F N S NS | Permeabilized tissue | Mouse | Skeletal muscle |
| Van Bree 2014 PhD Thesis | 2014 | van Bree B (2014) Mitochondria, lipotoxicity and skeletal muscle metabolism: implications for type 2 diabetes mellitus. PhD Thesis 1-150. | LEAK OXPHOS ET | F N | Isolated mitochondria | Mouse | Skeletal muscle |
| Van Den Brink 2018 PLoS Genet | 2018 | Van Den Brink DM, Cubizolle A, Chatelain G, Davoust N, Girard V, Johansen S, Napoletano F, Dourlen P, Guillou L, Angebault-Prouteau C, Bernoud-Hubac N, Guichardant M, Brabet P, Mollereau B (2018) Physiological and pathological roles of FATP-mediated lipid droplets in Drosophila and mice retina. PLoS Genet 14:e1007627. | LEAK OXPHOS | F N S NS | Permeabilized cells | Mouse | Endothelial;epithelial;mesothelial cell |
| Van Erp 2018 Sci Rep | 2018 | Van Erp AC, Rebolledo RA, Hoeksma D, Jespersen NR, Ottens PJ, Nørregaard R, Pedersen M, Laustsen C, Burgerhof JGM, Wolters JC, Ciapaite J, Bøtker HE, Leuvenink HGD, Jespersen B (2018) Organ-specific responses during brain death: increased aerobic metabolism in the liver and anaerobic metabolism with decreased perfusion in the kidneys. Sci Rep 8:4405. | OXPHOS ET | F N S NS | Isolated mitochondria | Rat | Liver Kidney |
| Van Eunen 2013 PLoS Comput Biol | 2013 | van Eunen K, Simons SM, Gerding A, Bleeker A, den Besten G, Touw CM, Houten SM, Groen BK, Krab K, Reijngoud DJ, Bakker BM (2013) Biochemical competition makes fatty-acid β-oxidation vulnerable to substrate overload. PLoS Comput Biol 9:e1003186. | ET | F N | Isolated mitochondria | Rat | Liver |
| Van Eunen 2016 BMC Biol | 2016 | van Eunen K, Volker-Touw CM, Gerding A, Bleeker A, Wolters JC, van Rijt WJ, Martines AM, Niezen-Koning KE, Heiner RM, Permentier H, Groen AK, Reijngoud DJ, Derks TG, Bakker BM (2016) Living on the edge: substrate competition explains loss of robustness in mitochondrial fatty-acid oxidation disorders. BMC Biol 14:107. | ET | F N | Isolated mitochondria | Mouse | Liver |
| Van Ewijk 2015 Obesity (Silver Spring) | 2015 | van Ewijk PA, Paglialunga S, Kooi ME, Nunes PM, Gemmink A, Slenter J, Kornips E, Jörgensen JA, Hoeks J, Wildberger JE, Hesselink MK, Glatz JF, Heerschap A, Kersten S, Schrauwen P, Schrauwen-Hinderling VB (2015) Effects of high-fat feeding on ectopic fat storage and postprandial lipid metabolism in mouse offspring. Obesity (Silver Spring) 23:2242-50. | LEAK OXPHOS | F N | Isolated mitochondria | Mouse | Heart Liver |
| Van Polanen 2021 Physiol Rep | 2021 | van Polanen N, Zacharewicz E, de Ligt M, Timmers S, Moonen-Kornips E, Schaart G, Hoeks J, Schrauwen P, Hesselink MKC (2021) Resveratrol-induced remodelling of myocellular lipid stores: A study in metabolically compromised humans. Physiol Rep 9:e14692. | OXPHOS ET | F N | Permeabilized tissue | Human | Skeletal muscle |
| Van Schaardenburgh 2016 PLOS ONE | 2016 | van Schaardenburgh M, Wohlwend M, Rognmo Ø, Mattsson EJ (2016) Mitochondrial respiration after one session of calf raise exercise in patients with peripheral vascular disease and healthy older adults. PLOS ONE 11:e0165038. | LEAK OXPHOS ET | F N S NS | Permeabilized tissue | Human | Skeletal muscle |
| Van Schaardenburgh 2017 J Transl Med | 2017 | van Schaardenburgh M, Wohlwend M, Rognmo Ø, Mattsson EJR (2017) Exercise in claudicants increase or decrease walking ability and the response relates to mitochondrial function. J Transl Med 15:130. | LEAK OXPHOS ET | F N S NS ROX | Permeabilized tissue | Human | Skeletal muscle |
| Van Schaardenburgh 2017 J Vasc Surg | 2017 | Van Schaardenburgh M, Wohlwend M, Rognmo Ø, Mattsson E (2017) Calf raise exercise increases walking performance in patients with intermittent claudication. J Vasc Surg 65:1473-82. | LEAK OXPHOS ET | F N S NS ROX | Permeabilized tissue | Human | Skeletal muscle |
| Van Zutphen 2016 J Hepatol | 2016 | van Zutphen T, Ciapaite J, Bloks VW, Ackereley C, Gerding A, Jurdzinski A, Allgayer de Moraes R, Zhang L, Wolters JC, Bischoff R, Wanders RJA, Houten SM, Bronte-Tinkew D, Shatseva T, Lewis GF, Groen AK, Reijngoud DJ, Bakker BM, Jonker JW, Kim PK, Bandsma RH (2016) Malnutrition-associated liver steatosis and ATP depletion is caused by peroxisomal and mitochondrial dysfunction. J Hepatol 65:1198-1208. | LEAK OXPHOS ET | F N NS Other combinations | Isolated mitochondria | Rat | Liver |
| Van de Weijer 2015 Diabetes | 2015 | van de Weijer T, Phielix E, Bilet L, Williams EG, Ropelle ER, Bierwagen A, Livingstone R, Nowotny P, Sparks LM, Paglialunga S, Szendroedi J, Havekes B, Moullan N, Pirinen E, Hwang JH, Schrauwen-Hinderling VB, Hesselink MK, Auwerx J, Roden M, Schrauwen P (2015) Evidence for a direct effect of the NAD+ precursor acipimox on muscle mitochondrial function in humans. Diabetes 64:1193-201. | LEAK OXPHOS ET | F N NS | Permeabilized tissue | Human | Skeletal muscle |
